2016 SEMS Hackathon: Model statistics

Dates: March 17-20, 2016
Location: University of Rostock, Department for Systems Biology and Bioinformatics

Goal

The workshop brings together young scientists interested in model management tasks, evolution of models, evaluation of semantic information, and hacking.

Participants

Andrea Bagnacani, University of Bologna, Italy
Tamas Galli, IT Services Hungary, Budapest, Hungary
Tom Gebhardt, University of Rostock
Ron Henkel, HITS gGMBH, Heidelberg
Martin Scharm, University of Rostock
Vasundra Toure, University of Rostock
Dagmar Waltemath, University of Rostock

Schedule

Thursday, March 17, 2016
5 pm Kick-off & get together

7 pm Dinner, Restaurant Kurhaus, Warnemuende

Friday, March 18, 2016
3 pm Introduction to the tools & problems

  • Difference detection,
  • BiVeS algorithm,
  • Model management tasks
  • Model repositories and SEMS libraries

4 pm Brain storming. Questions

  • What are the goals for the weekend?
  • What tasks will the single participants contribute to?

from 6 pm hacking

Saturday, March 19, 2016
10 am  Get together, plans for the day

from 11 am hacking. Foci:

  • Re-coding the model crawler,
  • Re-designing the statistics figures,
  • Code refinement,
  • Designing the web page

Sunday, March 20, 2016
10 am  Get together, plans for the day

from 11 am hacking. Foci:

  • Re-designing the statistics figures,
  • Code refinement,
  • Designing the web page
  • Writing up the results (manuscript preparation)

2pm final wrap up, discussion, future directions

3pm closing of the workshop