BiVeS – Code

Figure 1: BiVeS' modules

Figure 1: BiVeS’ modules and their dependencies

Since version 1.2 BiVeS consists of several submodules. The submodules are described in the following.
Have a look at the announcement to learn how to add the SEMS Maven repository. Binaries of our tools can be obtained from our binaries repository and you can find some documentation at the JavaDoc websites.

xmlutils

xmlutils is a toolkit useful when working with XML documents. You can grab a copy of its source code using:

1
git clone https://github.com/SemsProject/XMLUtils.git

Add the following to your pom.xml to include xmlutils in your Maven project:

1
2
3
de.unirostock.sems
xmlutils
[0.3,)

See also our Trac-Project: XML-Utils.

BiVeS Core Library

BiVeS-Core provides core functionality to compare computational models. You can grab a copy of its source code using:

1
git clone https://github.com/SemsProject/BiVeS-Core.git

Add the following to your pom.xml to include BiVeS-Core in your Maven project:

1
2
3
de.unirostock.sems
BiVeS-Core
[1.2,)

See also our Trac-Project: BiVeS-Core.

BiVeS SBML Utils

BiVeS-SBML provides SBML integration for BiVeS. You can grab a copy of its source code using:

1
git clone https://github.com/SemsProject/BiVeS-SBML.git

Add the following to your pom.xml to include BiVeS-SBML in your Maven project:

1
2
3
de.unirostock.sems
BiVeS-SBML
[1.2,)

See also our Trac-Project: BiVeS-SBML.

BiVeS CellML Utils

BiVeS-CellML provides CellML integration for BiVeS. You can grab a copy of its source code using:

1
git clone https://github.com/SemsProject/BiVeS-CellML.git

Add the following to your pom.xml to include BiVeS-CellML in your Maven project:

1
2
3
de.unirostock.sems
BiVeS-CellML
[1.2,)

See also our Trac-Project: BiVeS-CellML.

BiVeS Framework

BiVeS provides access to the BiVeS framework. You can grab a copy of its source code using:

1
git clone https://github.com/SemsProject/BiVeS.git

Add the following to your pom.xml to include BiVeS in your Maven project:

1
2
3
de.unirostock.sems
BiVeS
[1.2,)

See also our Trac-Project: BiVeS.

BiVeS WebApp

BiVeS-WebApp provides the BiVeS WebApp. You can grab a copy of its source code using:

1
git clone https://github.com/SemsProject/BiVeS-WS.git

See also our Trac-Project: BiVeS-WebService.

BiVeS WebApp Client

BiVeS-WS-Client provides access to the BiVeS-WebApp. You can grab a copy of its source code using:

1
git clone https://github.com/SemsProject/BiVeS-WS-Client.git

Add the following to your pom.xml to include the BiVeS WebApp Client in your Maven project:

1
2
3
de.unirostock.sems
BiVeS-WS-Client
[1.0,)

See also our Trac-Project: BiVeS-WS-Client.